Modeling

Atlas is a modular software with each script centered in a specific biological network

1. Metabolic Networks
2. Interaction Networks
   1. Protein-Protein Interaction Networks
   2. Protein-Small compounds Interaction Networks
   3. Protein-RNA Interaction Networks
   4. RNA-RNA Interaction Networks
   5. Transcription Factor-DNA Binding Site Interaction Networks
   6. Sigma Factor-Promoter Interaction Networks
3. Genome Graphs